Diff for 'OMEGA'

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<<TableOfContents()>>
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<<TableOfContents()>> == Instrument description ==

OMEGA covers the wavelengths 0.38-5.1 μm with 352 spectral channels, 7 to 20 nm wide. Spatial resolution varies from ~300 m to 5 km per pixel depending on the spacecraft altitude at the time of acquisition. OMEGA’s Signal-to-Noise ratio (or ‘S/N’) is better than 100 over the whole spectral range (and can reach 1000 for some spectels), allowing detection of absorption bands as shallow as ~1%.

The OMEGA instrument actually consists of two co-aligned grating spectrometers:

 * Visible and near infrared (VNIR) in the range 038-1,05 μm, building images in a “pushbroom” mode with a two-dimensional detector, with 96 elements in the spectral dimension
 * Short wavelength infrared (SWIR) in the range 0.93-5.1 μm, building images in a “whiskbroom” mode with two 128-element line detectors over the wavelength ranges 0.93-2.73 μm (SWIR-C) and 2.55-5.1 μm (SWIR-L)

A moving mirror generates images either 16, 32, 64 or 128 pixels wide depending on the altitude and speed of the spacecraft relative to Mars: the lower the altitude, the faster the spacecraft and the narrower the images in order to yield contiguous pixels with a sufficient integration time on each of them.

MEx orbit is indeed highly elliptical, which yields various observation conditions, with wide coverage at coarse spatial resolution from high altitude or finer spatial resolution but narrow coverage from low altitude, closer to periapsis. The secular precession of MEx orbit since mission start has allowed observation of most of the planet from various altitudes and at various local times. As a consequence, OMEGA observations have various spatial resolutions, various widths and have been obtained under various incidence and emission conditions. This particularity, notably with respect to most other datasets from spacecraft in heliosynchronous low mars orbit, has to be taken into account.

== Downloading and processing OMEGA data ==

From the “Map” tab, zoom-in on your region of interest, and then display one (or more) of the OMEGA layers in the layer controls (OMEGA dataset is divided by width to help sort products). You can see the CRISM product footprints. Use the “Select” button to choose the products you desire over an area. Use the right-click context menu to add your selection to your workspace.

{{/select_omega.jpg||width="800"}}

In the "Workspace" tab, you will see your products selection. OMEGA subproduct list consist only in a CATRDR entry. Select entries by ticking the input on the left column (you can use the "Select all" button to select all visible products) and click on the "Copy" action to request a copy of the data in your personal directory. You can then proceed to download products as described in the [[SFTP]] section.
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OMEGA covers the wavelengths 0.38-5.1 μm with 352 spectral channels, 7 to 20 nm wide. Spatial resolution varies from ~300 m to 5 km per pixel depending on the spacecraft altitude at the time of acquisition. OMEGA’s Signal-to-Noise ratio (or ‘S/N’) is better than 100 over the whole spectral range (and can reach 1000 for some spectels), allowing detection of absorption bands as shallow as ~1%. === Directory content ===
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The OMEGA instrument actually consists of two co-aligned grating spectrometers, one working in the visible and near infrared (VNIR) in the range 038-1,05 μm, the other in the short wavelength infrared (SWIR) in the range 0.93-5.1 μm. The VNIR spectrometer builds images in a “pushbroom” mode with a two-dimensional detector, with 96 elements in the spectral dimension. The SWIR spectrograph builds images in a “whiskbroom” mode with two 128-element line detectors over the wavelength ranges 0.93-2.73 μm (SWIR-C) and 2.55-5.1 μm (SWIR-L). A moving mirror generates images either 16, 32, 64 or 128 pixels wide depending on the altitude and speed of the spacecraft relative to Mars: the lower the altitude, the faster the spacecraft and the narrower the images in order to yield contiguous pixels with a sufficient integration time on each of them. MEx orbit is indeed highly elliptical, which yields various observation conditions, with wide coverage at coarse spatial resolution from high altitude or finer spatial resolution but narrow coverage from low altitude, closer to periapsis. The secular precession of MEx orbit since mission start has allowed observation of most of the planet from various altitudes and at various local times. As a consequence, OMEGA observations have various spatial resolutions, various widths and have been obtained under various incidence and emission conditions. This particularity, notably with respect to most other datasets from spacecraft in heliosynchronous low mars orbit, has to be taken into account. The content of an OMEGA product directory in MarsSI should look like:
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The first hierarchical sorting of the OMEGA data archive is the splitting in various ‘missions’ corresponding to the nominal science phase of MEx (Nom) and to 4 successive mission extensions (Ext1 to Ext4). In each ‘mission’, OMEGA data are sorted by MEx orbit number and observation number in each orbit. Each observation is archived as 2 binary files with plain-text headers at file beginning: a ORBNN/ ORBNNYY_X.QUB file with raw science data at the so-called ‘Level-1B’ (uncompressed, uncalibrated raw digital numbers issued from the detectors), and a GEMNN/ORBNNYY_X.NAV file holding geometrical observation parameters such as incidence angle, latitude and longitude, etc. (NNYY is orbit number, in decimal format up to 9999, then NN in hexadecimal format and YY in decimal format, eg. ‘BA32’; and X is observation number of orbit NNYY). A sequence of observations from one orbit typically starts (resp. ends) with a wide image at low spatial resolution taken from high altitude toward (resp. from) narrower images at higher spatial resolution taken closer to periapsis, ie. from low altitude.  ORB2976_4.QUB, ORB2976_4.NAV::
 :: raw data
 ORB2976_4_albedo.jpg, ORB2976_4_color_ir.jpg, ORB2976_4_color_vis.jpg::
 :: quicklooks
 ORB2976_4_corr.bsq, ORB2976_4_corr.bsq.hdr::
 :: calibrated and corrected cube
 ORB2976_4_geo.bsq, ORB2976_4_geo.bsq.hdr::
 :: calibrated, corrected and map-projected cube
 ORB2976_4_param.bsq, ORB2976_4_param.bsq.hdr::
 :: parameters
 ORB2976_4_param_p.bsq, ORB2976_4_param_p.bsq.hdr::
 :: parameters?

=== Calibrated products ===
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One final caveat to consider in using OMEGA data is the evolution of the instrument during the course of the nominal and successive extended missions. Several issues incrementally arose during the life of the instrument, mostly in the SWIR-C channel: the sensitivity of some spectels increased or decreased (‘hot’ and ‘cold’ spectels), which was mitigated by modifying their transfer function in the calibration, but some of those spectels eventually failed, resulting in an incremental loss of exploitable channels with time, mostly in the SWIR-C channel. Eventually the whole SWIR-C channel failed in ~2010. These artifacts, along with others, which arose in some observation modes, were mitigated by a continuously evolving pipeline of calibration from Level-1B to Level- 2 data. The calibration pipeline from Level-1B data to Level-2 is not yet available in MarsSI but will eventually be implemented when confidence in the product quality is deemed sufficient.
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{{{#!wiki warning
Important: please be advised that without the proper calibration routine to Level-2 (available from IAS) OMEGA data as available in ESA’s PSA or in MarsSI cannot readily be used.
One final caveat to consider in using OMEGA data is the evolution of the instrument during the course of the nominal and successive extended missions. Several issues incrementally arose during the life of the instrument, mostly in the SWIR-C channel: the sensitivity of some spectels increased or decreased (‘hot’ and ‘cold’ spectels), which was mitigated by modifying their transfer function in the calibration, but some of those spectels eventually failed, resulting in an incremental loss of exploitable channels with time, mostly in the SWIR-C channel. Eventually the whole SWIR-C channel failed in ~2010. These artifacts, along with others, which arose in some observation modes, were mitigated by a continuously evolving pipeline of calibration from Level-1B to Level- 2 data.

For more information on OMEGA instrument and data, check-out the OMEGA Experiment Archive Interface Control Document available from ESA’s Planetary Science Archive ([[http://www.sciops.esa.int/index.php?project=PSA&page=mex|http://www.sciops.esa.int/index.php?project=PSA&page=mex)]]: [[ftp://psa.esac.esa.int/pub/mirror/MARS-EXPRESS/OMEGA/MEX-M-OMEGA-2-EDR-FLIGHT-V1.0/DOCUMENT/EAICD_OMEGA.PDF]]

=== Working with OMEGA parameters ===

{{{#!wiki important
Please consider these products with a critical eye. Despite using labels describing specific mineral (or other) detection, please keep in mind that the '''spectral parameters mapping does not represent mineralogical maps'''. They are the result of spectral analysis results that are *USUALLY* typical of such minerals presence, and is presented as an evidence, but not a definitive proof of such.

To infer the true mineralogy of one location, the associated spectra (in `corr` or `corr_medianratio` cubes) should be studied carefully. Be cautious to not overinterpret instrument artefacts and other false positive as real results!
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For more information on OMEGA instrument and data, check-out the OMEGA Experiment Archive Interface Control Document available from ESA’s Planetary Science Archive (http://www.sciops.esa.int/index.php?project=PSA&page=mex): ftp://psa.esac.esa.int/pub/mirror/MARS-EXPRESS/OMEGA/MEX-M-OMEGA-2-EDR- FLIGHT-V1.0/DOCUMENT/EAICD_OMEGA.PDF The cubes produced by MarsSI contains computed spectral parameters. They account on each pixel for the likeness between the observation spectrum and the theoretical spectrum of a mineral specie, but can also give information on the position of absorption band, intensity of one particuliar band, etc. This cube is used to map spectral features.

The details of how the different parameters can be used are as follows (as in february 2021):

||<style="text-align: center;"> '''Band number''' ||<style="text-align: center;"> '''Parameter''' ||<style="text-align: center;"> '''Detections (__non exhaustive__)''' ||<style="text-align: center;"> '''Details''' ||
||<style="text-align: right;"> 1 || Quality || TODO || TODO ||
||<style="text-align: right;"> 2 || MOLA || TODO || TODO ||
||<style="text-align: right;"> 3 || Local || TODO || TODO ||
||<style="text-align: right;"> 4 || Olivine || TODO || TODO ||
||<style="text-align: right;"> 5 || LCP || TODO || TODO ||
||<style="text-align: right;"> 6 || HCP || TODO || TODO ||
||<style="text-align: right;"> 7 || Fe-(h)ox || TODO || TODO ||
||<style="text-align: right;"> 8 || [[FeMg]]-phy || TODO || TODO ||
||<style="text-align: right;"> >9 || [[FeMg]]-vermiculite || TODO || TODO ||
||<style="text-align: right;"> 10 || Al-phy || TODO || TODO ||
||<style="text-align: right;"> 11 || Chlorite || TODO || TODO ||
||<style="text-align: right;"> 12 || Prehnite || TODO || TODO ||
||<style="text-align: right;"> 13 || Carbonate || TODO || TODO ||
||<style="text-align: right;"> 14 || Jarosite || TODO || TODO ||
||<style="text-align: right;"> 15 || Monohyd. || TODO || TODO ||
||<style="text-align: right;"> 16 || Polyhyd. || TODO || TODO ||
||<style="text-align: right;"> 17 || Gypsum || TODO || TODO ||
||<style="text-align: right;"> 18 || Gypsum || TODO || TODO ||
||<style="text-align: right;"> 19 || R0702 || TODO || TODO ||
||<style="text-align: right;"> 20 || R0578 || TODO || TODO ||
||<style="text-align: right;"> 21 || R0505 || TODO || TODO ||
||<style="text-align: right;"> 22 || R2527 || TODO || TODO ||
||<style="text-align: right;"> 23 || R1500 || TODO || TODO ||
||<style="text-align: right;"> 24 || R1328 || TODO || TODO ||
||<style="text-align: right;"> 25 || R1084 || TODO || TODO ||
||<style="text-align: right;"> 26 || BD1500_H2O || TODO || TODO ||
||<style="text-align: right;"> 27 || BD1429_CO2 || TODO || TODO ||
||<style="text-align: right;"> 28 || BD229+BD234_CO2 || TODO || TODO ||
||<style="text-align: right;"> 29 || OLINDEX || TODO || TODO ||
||<style="text-align: right;"> 30 || LCP || TODO || TODO ||
||<style="text-align: right;"> 31 || HCP || TODO || TODO ||
||<style="text-align: right;"> 32 || Ody_Fe3+ || TODO || TODO ||
||<style="text-align: right;"> 33 || Ody_nanophaseFe || TODO || TODO ||
||<style="text-align: right;"> 34 || Ody_Pyroxene || TODO || TODO ||
||<style="text-align: right;"> 35 || Ody_OSP1 || TODO || TODO ||
||<style="text-align: right;"> 36 || Ody_OSP2 || TODO || TODO ||
||<style="text-align: right;"> 37 || Ody_OSP3 || TODO || TODO ||
||<style="text-align: right;"> 38 || Thermal || TODO || TODO ||
||<style="text-align: right;"> 39 || CO2 || TODO || TODO ||
||<style="text-align: right;"> 40 || No || TODO || TODO ||
||<style="text-align: right;"> 41 || No || TODO || TODO ||

=== Naming convention ===

The first hierarchical sorting of the OMEGA data archive is the splitting in various ‘missions’ corresponding to the nominal science phase of MEx (Nom) and to 4 successive mission extensions (Ext1 to Ext4). In each ‘mission’, OMEGA data are sorted by MEx orbit number and observation number in each orbit.

Each observation is archived as 2 binary files with plain-text headers at file beginning:

 * ORBNN/ORBNNYY_X.QUB: raw science data at the so-called ‘Level-1B’ (uncompressed, uncalibrated raw digital numbers issued from the detectors)
 * GEMNN/ORBNNYY_X.NAV: geometrical observation parameters such as incidence angle, latitude and longitude, etc.

Where

 * NNYY is orbit number with NN in hexadecimal format and YY in decimal format, eg. ‘BA32’
 * X is observation number of orbit NNYY

A sequence of observations from one orbit typically starts (resp. ends) with a wide image at low spatial resolution taken from high altitude toward (resp. from) narrower images at higher spatial resolution taken closer to periapsis, ie. from low altitude.

wiki/OMEGA/omega.jpg

OMEGA, the Observatoire pour la Minéralogie, l’Eau, les Glaces et l’Activité (Bibring et al., 2004), is a visible and near-infrared imaging spectrometer onboard ESA’s Mars Express (MEx) spacecraft, which has been operating in Mars orbit since 12/2003.

Instrument description

OMEGA covers the wavelengths 0.38-5.1 μm with 352 spectral channels, 7 to 20 nm wide. Spatial resolution varies from ~300 m to 5 km per pixel depending on the spacecraft altitude at the time of acquisition. OMEGA’s Signal-to-Noise ratio (or ‘S/N’) is better than 100 over the whole spectral range (and can reach 1000 for some spectels), allowing detection of absorption bands as shallow as ~1%.

The OMEGA instrument actually consists of two co-aligned grating spectrometers:

  • Visible and near infrared (VNIR) in the range 038-1,05 μm, building images in a “pushbroom” mode with a two-dimensional detector, with 96 elements in the spectral dimension
  • Short wavelength infrared (SWIR) in the range 0.93-5.1 μm, building images in a “whiskbroom” mode with two 128-element line detectors over the wavelength ranges 0.93-2.73 μm (SWIR-C) and 2.55-5.1 μm (SWIR-L)

A moving mirror generates images either 16, 32, 64 or 128 pixels wide depending on the altitude and speed of the spacecraft relative to Mars: the lower the altitude, the faster the spacecraft and the narrower the images in order to yield contiguous pixels with a sufficient integration time on each of them.

MEx orbit is indeed highly elliptical, which yields various observation conditions, with wide coverage at coarse spatial resolution from high altitude or finer spatial resolution but narrow coverage from low altitude, closer to periapsis. The secular precession of MEx orbit since mission start has allowed observation of most of the planet from various altitudes and at various local times. As a consequence, OMEGA observations have various spatial resolutions, various widths and have been obtained under various incidence and emission conditions. This particularity, notably with respect to most other datasets from spacecraft in heliosynchronous low mars orbit, has to be taken into account.

Downloading and processing OMEGA data

From the “Map” tab, zoom-in on your region of interest, and then display one (or more) of the OMEGA layers in the layer controls (OMEGA dataset is divided by width to help sort products). You can see the CRISM product footprints. Use the “Select” button to choose the products you desire over an area. Use the right-click context menu to add your selection to your workspace.

wiki/OMEGA/select_omega.jpg

In the "Workspace" tab, you will see your products selection. OMEGA subproduct list consist only in a CATRDR entry. Select entries by ticking the input on the left column (you can use the "Select all" button to select all visible products) and click on the "Copy" action to request a copy of the data in your personal directory. You can then proceed to download products as described in the SFTP section.

Data description

Directory content

The content of an OMEGA product directory in MarsSI should look like:

ORB2976_4.QUB, ORB2976_4.NAV
raw data
ORB2976_4_albedo.jpg, ORB2976_4_color_ir.jpg, ORB2976_4_color_vis.jpg
quicklooks
ORB2976_4_corr.bsq, ORB2976_4_corr.bsq.hdr
calibrated and corrected cube
ORB2976_4_geo.bsq, ORB2976_4_geo.bsq.hdr
calibrated, corrected and map-projected cube
ORB2976_4_param.bsq, ORB2976_4_param.bsq.hdr
parameters
ORB2976_4_param_p.bsq, ORB2976_4_param_p.bsq.hdr
parameters?

Calibrated products

Before OMEGA data can be used for science it must be processed to the so-called ‘Level-2’, which is calibrated radiance (in physical units: W.m-2.sr-1.μm-1) or reflectance (‘I/F’), which is radiance divided by the solar irradiance at Mars at the time of observation. Reflectance SWIR-C data to be used for spectral analysis of the surface can further be processed to remove (most of) the atmospheric CO2 absorptions using the so-called ‘volcano-scan’ correction (eg. Bibring et al., 1989; Mustard et al., 2005).

One final caveat to consider in using OMEGA data is the evolution of the instrument during the course of the nominal and successive extended missions. Several issues incrementally arose during the life of the instrument, mostly in the SWIR-C channel: the sensitivity of some spectels increased or decreased (‘hot’ and ‘cold’ spectels), which was mitigated by modifying their transfer function in the calibration, but some of those spectels eventually failed, resulting in an incremental loss of exploitable channels with time, mostly in the SWIR-C channel. Eventually the whole SWIR-C channel failed in ~2010. These artifacts, along with others, which arose in some observation modes, were mitigated by a continuously evolving pipeline of calibration from Level-1B to Level- 2 data.

For more information on OMEGA instrument and data, check-out the OMEGA Experiment Archive Interface Control Document available from ESA’s Planetary Science Archive (http://www.sciops.esa.int/index.php?project=PSA&page=mex): ftp://psa.esac.esa.int/pub/mirror/MARS-EXPRESS/OMEGA/MEX-M-OMEGA-2-EDR-FLIGHT-V1.0/DOCUMENT/EAICD_OMEGA.PDF

Working with OMEGA parameters

Please consider these products with a critical eye. Despite using labels describing specific mineral (or other) detection, please keep in mind that the spectral parameters mapping does not represent mineralogical maps. They are the result of spectral analysis results that are *USUALLY* typical of such minerals presence, and is presented as an evidence, but not a definitive proof of such.

To infer the true mineralogy of one location, the associated spectra (in corr or corr_medianratio cubes) should be studied carefully. Be cautious to not overinterpret instrument artefacts and other false positive as real results!

The cubes produced by MarsSI contains computed spectral parameters. They account on each pixel for the likeness between the observation spectrum and the theoretical spectrum of a mineral specie, but can also give information on the position of absorption band, intensity of one particuliar band, etc. This cube is used to map spectral features.

The details of how the different parameters can be used are as follows (as in february 2021):

Band number Parameter Detections (non exhaustive) Details
1 Quality TODO TODO
2 MOLA TODO TODO
3 Local TODO TODO
4 Olivine TODO TODO
5 LCP TODO TODO
6 HCP TODO TODO
7 Fe-(h)ox TODO TODO
8 FeMg-phy TODO TODO
>9 FeMg-vermiculite TODO TODO
10 Al-phy TODO TODO
11 Chlorite TODO TODO
12 Prehnite TODO TODO
13 Carbonate TODO TODO
14 Jarosite TODO TODO
15 Monohyd. TODO TODO
16 Polyhyd. TODO TODO
17 Gypsum TODO TODO
18 Gypsum TODO TODO
19 R0702 TODO TODO
20 R0578 TODO TODO
21 R0505 TODO TODO
22 R2527 TODO TODO
23 R1500 TODO TODO
24 R1328 TODO TODO
25 R1084 TODO TODO
26 BD1500_H2O TODO TODO
27 BD1429_CO2 TODO TODO
28 BD229+BD234_CO2 TODO TODO
29 OLINDEX TODO TODO
30 LCP TODO TODO
31 HCP TODO TODO
32 Ody_Fe3+ TODO TODO
33 Ody_nanophaseFe TODO TODO
34 Ody_Pyroxene TODO TODO
35 Ody_OSP1 TODO TODO
36 Ody_OSP2 TODO TODO
37 Ody_OSP3 TODO TODO
38 Thermal TODO TODO
39 CO2 TODO TODO
40 No TODO TODO
41 No TODO TODO

Naming convention

The first hierarchical sorting of the OMEGA data archive is the splitting in various ‘missions’ corresponding to the nominal science phase of MEx (Nom) and to 4 successive mission extensions (Ext1 to Ext4). In each ‘mission’, OMEGA data are sorted by MEx orbit number and observation number in each orbit.

Each observation is archived as 2 binary files with plain-text headers at file beginning:

  • ORBNN/ORBNNYY_X.QUB: raw science data at the so-called ‘Level-1B’ (uncompressed, uncalibrated raw digital numbers issued from the detectors)
  • GEMNN/ORBNNYY_X.NAV: geometrical observation parameters such as incidence angle, latitude and longitude, etc.

Where

  • NNYY is orbit number with NN in hexadecimal format and YY in decimal format, eg. ‘BA32’
  • X is observation number of orbit NNYY

A sequence of observations from one orbit typically starts (resp. ends) with a wide image at low spatial resolution taken from high altitude toward (resp. from) narrower images at higher spatial resolution taken closer to periapsis, ie. from low altitude.

References

  • Bibring, J.-P., et al. (2004), OMEGA: Observatoire pour la Minéralogie, l'Eau, les Glaces et l'Activité, in Mars Express - The Scientific Payload, European Space Agency Special Publication, SP-1240, edited, pp. 37-49, ESA.
  • Bibring, J. P., et al. (1989), Results from the Ism Experiment, Nature, 341(6243), 591-593.
  • Mustard, J. F., et al. (2005), Olivine and pyroxene, diversity in the crust of Mars, Science, 307(5715), 1594-1597.